If I create a note using the squared paper, positioning text (in text boxes), export that as a flattened PDF, import it as a template and use it, the typed text area no longer correctly aligns.

It's weird, it's not starting the typed text box in the same place on the template as it is on the squared paper template, and the text seems to have a larger size or more of a gap between lines as it starts to creep line by line down the page (see example below).
Should be a (super-)quick fix?